Transcript: lnc-TSTD2-4:5

Basic information

LNCipedia transcript ID: lnc-TSTD2-4:5 
LNCipedia gene ID: lnc-TSTD2-4
RefSeq ID: NR_026847
Location (hg38): chr9:97390836-97396691
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2018 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026847.1
Alternative gene names: LOC286359


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.2561 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSTD2-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-FANCC-49:3
5.1 lnc-FANCC-49:3
5.2 lnc-TSTD2-4:5