Transcript: lnc-TSHZ2-11:2

Basic information

LNCipedia transcript ID: lnc-TSHZ2-11:2 
LNCipedia gene ID: lnc-TSHZ2-11
Location (hg38): chr20:53738648-53746620
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6428 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA852:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.2181 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSHZ2-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TSHZ2-11:2
4.1 lnc-TSHZ2-11:2
5.0 lnc-TSHZ2-11:2
5.1 lnc-MC3R-36:5
5.2 lnc-TSHZ2-11:2