Transcript: lnc-TSHR-2:6

Basic information

LNCipedia transcript ID: lnc-TSHR-2:6 
LNCipedia gene ID: lnc-TSHR-2
Location (hg38): chr14:81219499-81220001
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 503 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000019710.1|MICT00000108078.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.986 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSHR-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TSHR-2:6
5.0 lnc-TSHR-2:6
5.1 lnc-FLRT2-18:1
5.2 lnc-TSHR-2:6