Transcript: lnc-TRRAP-5:2

Basic information

LNCipedia transcript ID: lnc-TRRAP-5:2 
LNCipedia gene ID: lnc-TRRAP-5
Location (hg38): chr7:99144222-99148585
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4364 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000093205.1|ENCT00000402809.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.7614 non-coding 
CPAT coding probability 2.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRRAP-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TRRAP-5:2
5.0 lnc-TRRAP-5:2
5.1 lnc-LAMTOR4-42:2
5.2 lnc-TRRAP-5:2