Transcript: lnc-TRMT61B-5:7

Basic information

LNCipedia transcript ID: lnc-TRMT61B-5:7 
LNCipedia gene ID: lnc-TRMT61B-5
Location (hg38): chr2:28384409-28394676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2854 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229951.1|ENST00000427929.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.2605 non-coding 
CPAT coding probability 11.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRMT61B-5:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TRMT61B-5:7
5.0 lnc-TRMT61B-5:7
5.1 lnc-RBKS-20:6
5.2 lnc-TRMT61B-5:7