Transcript: lnc-TRIML2-14:6

Basic information

LNCipedia transcript ID: lnc-TRIML2-14:6 
LNCipedia gene ID: lnc-TRIML2-14
Location (hg38): chr4:188791072-188795776
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00009205
Alternative gene names: XLOC_004227; linc-TRIML2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.9659 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIML2-14:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRIML2-5:6
3.1 lnc-TRIML2-6:6
4.0 lnc-TRIML2-14:6
4.1 lnc-TRIML2-14:6
5.0 lnc-TRIML2-14:6
5.1 lnc-FRG2-16:6
5.2 lnc-TRIML2-14:6