Transcript: lnc-TRIM43B-7:2

Basic information

LNCipedia transcript ID: lnc-TRIM43B-7:2 
LNCipedia gene ID: lnc-TRIM43B-7
Location (hg38): chr2:95408891-95413975
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4693 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT147105
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.0517 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM43B-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF514-7:2
4.0 lnc-ZNF514-7:2
4.1 lnc-ZNF514-7:2
5.0 lnc-ZNF514-7:2
5.1 lnc-ZNF514-19:2
5.2 lnc-TRIM43B-7:2