Transcript: lnc-TRIM36-4:5

Basic information

LNCipedia transcript ID: lnc-TRIM36-4:5 
LNCipedia gene ID: lnc-TRIM36-4
RefSeq ID: NR_130785
Location (hg38): chr5:114447418-114773413
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2033 bp
Exons: 13
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130785.1
Alternative gene names: LOC101927078


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.8945 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM36-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LOX-119:2
5.1 lnc-LOX-119:2
5.2 lnc-TRIM36-4:5