Transcript: lnc-TRIM29-9:9

Basic information

LNCipedia transcript ID: lnc-TRIM29-9:9 
LNCipedia gene ID: lnc-TRIM29-9
Location (hg38): chr11:119987966-119989466
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 662 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT024699
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.6069 non-coding 
CPAT coding probability 4.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM29-9:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-831A10.1.1-1:10
4.0 lnc-RP11-831A10.1.1-1:10
4.1 lnc-RP11-831A10.1.1-1:10
5.0 lnc-RP11-831A10.1.1-1:10
5.1 lnc-SLC37A4-37:9
5.2 lnc-TRIM29-9:9