Transcript: lnc-TRAPPC6A-3:2

Basic information

LNCipedia transcript ID: lnc-TRAPPC6A-3:2 
LNCipedia gene ID: lnc-TRAPPC6A-3
Location (hg38): chr19:45245155-45245407
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 253 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267045.1|FTMT27400002116.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRAPPC6A-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EXOC3L2-1:3
5.0 lnc-EXOC3L2-1:3
5.1 lnc-GPR4-12:2
5.2 lnc-TRAPPC6A-3:2