Transcript: lnc-TPRA1-3:1

Basic information

LNCipedia transcript ID: lnc-TPRA1-3:1 
LNCipedia gene ID: lnc-TPRA1-3
Location (hg38): chr3:127748780-127757888
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1471 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2456_chr3:127467622-127476731_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5057 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPRA1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPRA1-3:1
4.0 lnc-TPRA1-3:1
4.1 lnc-TPRA1-3:1
5.0 lnc-TPRA1-3:1
5.1 lnc-RUVBL1-3:1
5.2 lnc-TPRA1-3:1