Transcript: lnc-TPM4-2:25

Basic information

LNCipedia transcript ID: lnc-TPM4-2:25 
LNCipedia gene ID: lnc-TPM4-2
Location (hg38): chr19:16051929-16052689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT062758
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 290.5651 coding 
CPAT coding probability 8.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TPM4-2:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004790.1-2:1
4.0 lnc-AC004790.1-2:1
4.1 lnc-AC004790.1-2:1
5.0 lnc-AC004790.1-2:1
5.1 lnc-MAP1S-49:1
5.2 lnc-TPM4-2:25