Transcript: lnc-TPBG-2:1

Basic information

LNCipedia transcript ID: lnc-TPBG-2:1 
LNCipedia gene ID: lnc-TPBG-2
Location (hg38): chr6:82271287-82272551
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 912 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011877; NONHSAT113762
Alternative gene names: XLOC_005368; linc-TPBG-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.8057 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPBG-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPBG-2:1
3.1 lnc-TPBG-2:1
4.0 lnc-TPBG-2:1
4.1 lnc-TPBG-2:1
5.0 lnc-TPBG-2:1
5.1 lnc-CYB5R4-18:1
5.2 lnc-TPBG-2:1