Transcript: lnc-TP53TG3F-3:2

Basic information

LNCipedia transcript ID: lnc-TP53TG3F-3:2 
LNCipedia gene ID: lnc-TP53TG3F-3
Location (hg38): chr16:35030380-35032430
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 758 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024373; NONHSAT142149
Alternative gene names: XLOC_011697; linc-ORC6-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.3329 non-coding 
CPAT coding probability 21.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3F-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2144E22.5.1-1:1
3.1 lnc-CTD-2144E22.5.1-1:1
4.0 lnc-CTD-2144E22.5.1-1:1
4.1 lnc-CTD-2144E22.5.1-1:1
5.0 lnc-CTD-2144E22.5.1-1:1
5.1 lnc-ZNF646-114:2
5.2 lnc-TP53TG3F-3:2