Transcript: lnc-TP53TG3-45:2

Basic information

LNCipedia transcript ID: lnc-TP53TG3-45:2 
LNCipedia gene ID: lnc-TP53TG3-45
Location (hg38): chr16:33989506-33991433
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 217 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA538:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 95.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TP53TG3-45:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC140658.1-7:2
4.1 lnc-AC140658.1-7:2
5.0 lnc-AC140658.1-7:2
5.1 lnc-SULT1A2-196:2
5.2 lnc-TP53TG3-45:2