Transcript: lnc-TP53TG3-38:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3-38:1 
LNCipedia gene ID: lnc-TP53TG3-38
Location (hg38): chr16:33875039-33875468
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 348 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT142113
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.8974 non-coding 
CPAT coding probability 17.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3-38:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC136428.1.1-10:1
4.0 lnc-AC136428.1.1-10:1
4.1 lnc-AC136428.1.1-10:1
5.0 lnc-AC136428.1.1-10:1
5.1 lnc-SULT1A2-189:1
5.2 lnc-TP53TG3-38:1