Transcript: lnc-TP53RK-1:4

Basic information

LNCipedia transcript ID: lnc-TP53RK-1:4 
LNCipedia gene ID: lnc-TP53RK-1
Location (hg38): chr20:46899766-46901709
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1461 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236028.1|FTMT27700005337.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.7909 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53RK-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TP53RK-1:4
5.0 lnc-TP53RK-1:4
5.1 lnc-SULF2-26:3
5.2 lnc-TP53RK-1:4