Transcript: lnc-TP53-2:2

Basic information

LNCipedia transcript ID: lnc-TP53-2:2 
LNCipedia gene ID: lnc-TP53-2
Location (hg38): chr17:7714276-7717648
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3109 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032962.1|ENCT00000180629.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.4257 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TP53-2:2
5.0 lnc-TP53-2:2
5.1 lnc-YBX2-19:2
5.2 lnc-TP53-2:2