Transcript: lnc-TOP2B-4:2

Basic information

LNCipedia transcript ID: lnc-TOP2B-4:2 
LNCipedia gene ID: lnc-TOP2B-4
RefSeq ID: NR_134933
Location (hg38): chr3:25383105-25384927
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134933.1
Alternative gene names: LOC105376997


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -190.7963 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TOP2B-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GADL1-38:1
5.1 lnc-GADL1-38:1
5.2 lnc-TOP2B-4:2