Transcript: lnc-TNXB-1:3

Basic information

LNCipedia transcript ID: lnc-TNXB-1:3 
LNCipedia gene ID: lnc-TNXB-1
Location (hg38): chr6:32098178-32109374
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 222 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT108877
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 7.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNXB-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATF6B-1:3
4.0 lnc-TNXB-1:3
4.1 lnc-TNXB-1:3
5.0 lnc-TNXB-1:3
5.1 lnc-DXO-1:3
5.2 lnc-TNXB-1:3