Transcript: lnc-TNPO3-1:11

Basic information

LNCipedia transcript ID: lnc-TNPO3-1:11 
LNCipedia gene ID: lnc-TNPO3-1
Location (hg38): chr7:128893817-128908479
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 843 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT123275
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1629.2377 coding 
CPAT coding probability 99.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TNPO3-1:11 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNPO3-1:11
4.0 lnc-TNPO3-1:11
4.1 lnc-TNPO3-1:11
5.0 lnc-TNPO3-1:11
5.1 lnc-UBE2H-14:1
5.2 lnc-TNPO3-1:11