Transcript: lnc-TNN-1:1

Basic information

LNCipedia transcript ID: lnc-TNN-1:1 
LNCipedia gene ID: lnc-TNN-1
Location (hg38): chr1:175157534-175158530
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 801 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000437695
Alternative gene names: ENSG00000227085; RP5-1141O19.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.3569 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNN-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNN-1:1
3.1 lnc-TNN-1:1
4.0 lnc-TNN-1:1
4.1 lnc-TNN-1:1
5.0 lnc-TNN-1:1
5.1 lnc-SOAT1-32:1
5.2 lnc-TNN-1:1