Transcript: lnc-TNFRSF13B-5:5

Basic information

LNCipedia transcript ID: lnc-TNFRSF13B-5:5 
LNCipedia gene ID: lnc-TNFRSF13B-5
Location (hg38): chr17:16923996-16932505
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1573 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT146026
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.6781 coding 
CPAT coding probability 99.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TNFRSF13B-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNFRSF13B-5:5
4.0 lnc-TNFRSF13B-5:5
4.1 lnc-TNFRSF13B-5:5
5.0 lnc-TNFRSF13B-5:5
5.1 lnc-COPS3-14:4
5.2 lnc-TNFRSF13B-5:5