Transcript: lnc-TMEM99-5:5

Basic information

LNCipedia transcript ID: lnc-TMEM99-5:5 
LNCipedia gene ID: lnc-TMEM99-5
Location (hg38): chr17:40648037-40650454
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2418 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000031345.1|FTMT26800002147.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.4777 non-coding 
CPAT coding probability 3.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM99-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM99-5:5
5.0 lnc-TMEM99-5:5
5.1 lnc-THRA-35:2
5.2 lnc-TMEM99-5:5