Transcript: lnc-TMEM74B-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM74B-1:1 
LNCipedia gene ID: lnc-TMEM74B-1
Location (hg38): chr20:1185838-1187870
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028278; NONHSAT078093
Alternative gene names: XLOC_013623; linc-C20orf46


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.6107 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM74B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM74B-1:1
3.1 lnc-TMEM74B-1:1
4.0 lnc-TMEM74B-1:1
4.1 lnc-TMEM74B-1:1
5.0 lnc-TMEM74B-1:1
5.1 lnc-RNF24-66:1
5.2 lnc-TMEM74B-1:1