Transcript: lnc-TMEM70-2:2

Basic information

LNCipedia transcript ID: lnc-TMEM70-2:2 
LNCipedia gene ID: lnc-TMEM70-2
Ensembl Gene ID: ENSG00000254538
Ensembl Transcript ID: ENST00000534723
Location (hg38): chr8:73727843-73732897
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000534723; ENST00000534723.1; RP11-463D19.1-002; OTTHUMT00000382799.1; NONHSAT127261
Alternative gene names: ENSG00000254538; RP11-463D19.1; ENSG00000254538.1; OTTHUMG00000165228.1; AC027018.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -302.9721 non-coding 
CPAT coding probability 7.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM70-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM70-2:2
3.1 lnc-TMEM70-2:2
4.0 lnc-TMEM70-2:2
4.1 lnc-TMEM70-2:2
5.0 lnc-TMEM70-2:2
5.1 lnc-SULF1-36:2
5.2 lnc-TMEM70-2:2