Transcript: lnc-TMEM70-1:8

Basic information

LNCipedia transcript ID: lnc-TMEM70-1:8 
LNCipedia gene ID: lnc-TMEM70-1
Location (hg38): chr8:73879046-73883060
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2991 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000099396.1|ENCT00000426590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -87.8797 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM70-1:8 no no no no

Available literature

  1. Shi (2015), Circulating lncRNAs associated with occurrence of colorectal cancer progression., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM70-1:8
5.0 lnc-TMEM70-1:8
5.1 lnc-SULF1-39:4
5.2 lnc-TMEM70-1:8