Transcript: lnc-TMEM70-1:6

Basic information

LNCipedia transcript ID: lnc-TMEM70-1:6 
LNCipedia gene ID: lnc-TMEM70-1
Location (hg38): chr8:73879009-73882295
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 574 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127266
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.9527 non-coding 
CPAT coding probability 4.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM70-1:6 no no no no

Available literature

  1. Shi (2015), Circulating lncRNAs associated with occurrence of colorectal cancer progression., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM70-1:6
4.0 lnc-TMEM70-1:6
4.1 lnc-TMEM70-1:6
5.0 lnc-TMEM70-1:6
5.1 lnc-SULF1-39:1
5.2 lnc-TMEM70-1:6