Transcript: lnc-TMEM26-3:3

Basic information

LNCipedia transcript ID: lnc-TMEM26-3:3 
LNCipedia gene ID: lnc-TMEM26-3
Location (hg38): chr10:61781756-61821246
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00017987; ENST00000441001; ENST00000441001.1; RP11-491H19.1-001; OTTHUMT00000048231.1; NONHSAT013570
Alternative gene names: XLOC_008833; linc-TMEM26-1; ENSG00000233643; RP11-491H19.1; ENSG00000233643.1; OTTHUMG00000018296.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.8645 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM26-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RTKN2-3:2
3.1 lnc-RTKN2-3:2
4.0 lnc-TMEM26-3:3
4.1 lnc-TMEM26-3:3
5.0 lnc-TMEM26-3:3
5.1 lnc-MBL2-41:2
5.2 lnc-TMEM26-3:3