Transcript: lnc-TMEM255B-5:22

Basic information

LNCipedia transcript ID: lnc-TMEM255B-5:22 
LNCipedia gene ID: lnc-TMEM255B-5
Ensembl Gene ID: ENSG00000229373
Ensembl Transcript ID: ENST00000609661
Location (hg38): chr13:113888306-113923512
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2896 bp
Exons: 8
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609661.1; ENST00000609661.5
Alternative gene names: ENSG00000229373.4; LINC00452; ENSG00000229373.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.8346 non-coding 
CPAT coding probability 99.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM255B-5:22 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM70B-5:4
4.0 lnc-FAM70B-5:4
4.1 lnc-FAM70B-5:4
5.0 lnc-FAM70B-5:4
5.1 lnc-TMEM255B-5:3
5.2 lnc-TMEM255B-5:22