Transcript: lnc-TMEM238L-16:5

Basic information

LNCipedia transcript ID: lnc-TMEM238L-16:5 
LNCipedia gene ID: lnc-TMEM238L-16
Location (hg38): chr17:10801799-10804064
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2266 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT145653
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 781.8725 coding 
CPAT coding probability 15.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM238L-16:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIRT-1:7
4.0 LINC00675:3
4.1 LINC00675:3
5.0 LINC00675:3
5.1 lnc-GAS7-16:5
5.2 lnc-TMEM238L-16:5