Transcript: lnc-TMEM215-1:2

Basic information

LNCipedia transcript ID: lnc-TMEM215-1:2 
LNCipedia gene ID: lnc-TMEM215-1
Location (hg38): chr9:32738966-32743399
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 312 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00016551
Alternative gene names: XLOC_007314; linc-TMEM215-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.8529 non-coding 
CPAT coding probability 39.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM215-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM215-1:2
3.1 lnc-TMEM215-1:2
4.0 lnc-TMEM215-1:2
4.1 lnc-TMEM215-1:2
5.0 lnc-TMEM215-1:2
5.1 lnc-RECK-73:2
5.2 lnc-TMEM215-1:2