Transcript: lnc-TMEM173-2:4

Basic information

LNCipedia transcript ID: lnc-TMEM173-2:4 
LNCipedia gene ID: lnc-TMEM173-2
Location (hg38): chr5:139481846-139482720
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 628 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT104110
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.0132 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM173-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ECSCR-2:3
4.0 lnc-TMEM173-2:4
4.1 lnc-TMEM173-2:4
5.0 lnc-TMEM173-2:4
5.1 lnc-DND1-36:3
5.2 lnc-TMEM173-2:4