Transcript: lnc-TMEM132C-6:11

Basic information

LNCipedia transcript ID: lnc-TMEM132C-6:11 
LNCipedia gene ID: lnc-TMEM132C-6
Ensembl Gene ID: ENSG00000278266
Ensembl Transcript ID: ENST00000617117
Location (hg38): chr12:127147149-127150081
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2933 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617117.1
Alternative gene names: ENSG00000278266.1; RP11-575F12.3; AC079949.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.4329 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM132C-6:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMEM132C-6:11
4.1 lnc-TMEM132C-6:11
5.0 lnc-TMEM132C-6:11
5.1 lnc-RFLNA-35:9
5.2 lnc-TMEM132C-6:11