Transcript: lnc-TIMP3-10:1

Basic information

LNCipedia transcript ID: lnc-TIMP3-10:1 
LNCipedia gene ID: lnc-TIMP3-10
Location (hg38): chr22:33921313-33923637
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1442 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273082.1|HBMT00000941182.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.3388 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIMP3-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TIMP3-8:2
5.0 lnc-TIMP3-8:2
5.1 lnc-MCM5-45:1
5.2 lnc-TIMP3-10:1