Transcript: lnc-TIGD4-2:2

Basic information

LNCipedia transcript ID: lnc-TIGD4-2:2 
LNCipedia gene ID: lnc-TIGD4-2
RefSeq ID: NR_136614
Location (hg38): chr4:152934516-152936837
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1124 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT098822; NR_136614.1
Alternative gene names: LOC729870


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.0706 non-coding 
CPAT coding probability 5.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TIGD4-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGD4-2:2
4.0 lnc-TIGD4-2:2
4.1 lnc-TIGD4-2:2
5.0 lnc-TIGD4-2:2
5.1 lnc-TIGD4-2:2
5.2 lnc-TIGD4-2:2