Transcript: lnc-THOC2-5:3

Basic information

LNCipedia transcript ID: lnc-THOC2-5:3 
LNCipedia gene ID: lnc-THOC2-5
Location (hg38): chrX:123958938-123961542
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2605 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232412.1|HBMT00001552041.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -103.3041 non-coding 
CPAT coding probability 10.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THOC2-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-THOC2-5:3
5.0 lnc-THOC2-5:3
5.1 lnc-CT47A8-48:3
5.2 lnc-THOC2-5:3