Transcript: lnc-THBS2-5:10

Basic information

LNCipedia transcript ID: lnc-THBS2-5:10 
LNCipedia gene ID: lnc-THBS2-5
Location (hg38): chr6:168922053-168927877
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 472 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012366; NONHSAT116164
Alternative gene names: XLOC_005931; linc-DACT2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.2058 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THBS2-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-THBS2-7:1
3.1 lnc-THBS2-7:1
4.0 lnc-THBS2-7:1
4.1 lnc-THBS2-7:1
5.0 lnc-THBS2-7:1
5.1 lnc-PRKN-76:10
5.2 lnc-THBS2-5:10