Transcript: lnc-THAP9-2:1

Basic information

LNCipedia transcript ID: lnc-THAP9-2:1 
LNCipedia gene ID: lnc-THAP9-2
Location (hg38): chr4:82775461-82776101
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 360 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT097176
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.1027 non-coding 
CPAT coding probability 5.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-THAP9-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THAP9-2:1
4.0 lnc-THAP9-2:1
4.1 lnc-THAP9-2:1
5.0 lnc-THAP9-2:1
5.1 lnc-GPAT3-9:1
5.2 lnc-THAP9-2:1