Transcript: lnc-TGFB3-6:1

Basic information

LNCipedia transcript ID: lnc-TGFB3-6:1 
LNCipedia gene ID: lnc-TGFB3-6
Location (hg38): chr14:76138933-76145944
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1817 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001xta_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.2111 non-coding 
CPAT coding probability 21.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TGFB3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGFB3-6:1
4.0 lnc-TGFB3-6:1
4.1 lnc-TGFB3-6:1
5.0 lnc-TGFB3-6:1
5.1 lnc-PROX2-21:1
5.2 lnc-TGFB3-6:1