Transcript: lnc-TFPT-3:2

Basic information

LNCipedia transcript ID: lnc-TFPT-3:2 
LNCipedia gene ID: lnc-TFPT-3
Location (hg38): chr19:54127106-54136993
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 829 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237017.1|ENCT00000217414.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.9949 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TFPT-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TFPT-3:2
5.0 lnc-TFPT-3:2
5.1 lnc-TMC4-5:2
5.2 lnc-TFPT-3:2