Transcript: lnc-TEX9-6:5

Basic information

LNCipedia transcript ID: lnc-TEX9-6:5 
LNCipedia gene ID: lnc-TEX9-6
Location (hg38): chr15:55993820-56193681
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1685 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000023105.1|MICT00000117103.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 81.8206 coding 
CPAT coding probability 7.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TEX9-6:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TEX9-6:5
5.0 lnc-TEX9-6:5
5.1 lnc-MAP2K1-141:5
5.2 lnc-TEX9-6:5