Transcript: lnc-TERF2-1:1

Basic information

LNCipedia transcript ID: lnc-TERF2-1:1 
LNCipedia gene ID: lnc-TERF2-1
Location (hg38): chr16:69421575-69421843
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT143355; FPKM1_group_11807_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1151 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TERF2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TERF2-1:1
4.0 lnc-TERF2-1:1
4.1 lnc-TERF2-1:1
5.0 lnc-TERF2-1:1
5.1 lnc-NOB1-8:1
5.2 lnc-TERF2-1:1