Transcript: lnc-TERB1-4:1

Basic information

LNCipedia transcript ID: lnc-TERB1-4:1 
LNCipedia gene ID: lnc-TERB1-4
Ensembl Gene ID: ENSG00000258122
Ensembl Transcript ID: ENST00000551187
Location (hg38): chr16:66841433-66853448
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 434 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551187.1; RP11-61A14.1-001; OTTHUMT00000407432.1; NONHSAT143046
Alternative gene names: ENSG00000258122.1; RP11-61A14.1; OTTHUMG00000170125.1; AC044802.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.3148 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TERB1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDH16-2:1
4.0 lnc-CDH16-2:1
4.1 lnc-CDH16-2:1
5.0 lnc-CDH16-2:1
5.1 lnc-PSMB10-32:1
5.2 lnc-TERB1-4:1