Transcript: lnc-TENM1-5:1

Basic information

LNCipedia transcript ID: lnc-TENM1-5:1 
LNCipedia gene ID: lnc-TENM1-5
Location (hg38): chrX:125212282-125217435
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3826 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3964_chrX:124346130-124351284_76bGuttman_hES
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.1169 non-coding 
CPAT coding probability 70.44% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TENM1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ODZ1-5:1
4.0 lnc-ODZ1-5:1
4.1 lnc-ODZ1-5:1
5.0 lnc-ODZ1-5:1
5.1 lnc-CT47A8-58:1
5.2 lnc-TENM1-5:1