Transcript: lnc-TDRD3-19:2

Basic information

LNCipedia transcript ID: lnc-TDRD3-19:2 
LNCipedia gene ID: lnc-TDRD3-19
Location (hg38): chr13:65995554-66053987
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 386 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021815; NONHSAT034203
Alternative gene names: XLOC_010416; linc-C13orf34-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.7991 non-coding 
CPAT coding probability 10.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-10:1
3.1 lnc-AL445989.1-11:1
4.0 lnc-AL445989.1-11:1
4.1 lnc-AL445989.1-11:1
5.0 lnc-AL445989.1-11:1
5.1 lnc-KL-281:2
5.2 lnc-TDRD3-19:2