Transcript: lnc-TDRD3-18:1

Basic information

LNCipedia transcript ID: lnc-TDRD3-18:1 
LNCipedia gene ID: lnc-TDRD3-18
Location (hg38): chr13:65941063-65977811
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5488 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021814; NONHSAT034200
Alternative gene names: XLOC_010415; linc-C13orf34-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.1268 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL445989.1-9:1
3.1 lnc-AL445989.1-10:1
4.0 lnc-AL445989.1-10:1
4.1 lnc-AL445989.1-10:1
5.0 lnc-AL445989.1-10:1
5.1 lnc-KL-280:1
5.2 lnc-TDRD3-18:1