Transcript: lnc-TBL2-2:1

Basic information

LNCipedia transcript ID: lnc-TBL2-2:1 
LNCipedia gene ID: lnc-TBL2-2
Ensembl Gene ID: ENSG00000274080
Ensembl Transcript ID: ENST00000619486
Location (hg38): chr7:73609262-73611502
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2241 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619486.1
Alternative gene names: ENSG00000274080.1; CTA-315H11.2; AC005089.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.044 non-coding 
CPAT coding probability 10.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBL2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TBL2-2:1
4.1 lnc-TBL2-2:1
5.0 lnc-TBL2-2:1
5.1 lnc-TRIM74-15:1
5.2 lnc-TBL2-2:1