Transcript: lnc-TBCCD1-4:65

Basic information

LNCipedia transcript ID: lnc-TBCCD1-4:65 
LNCipedia gene ID: lnc-TBCCD1-4
Location (hg38): chr3:186736430-186772961
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 479 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000197099.4|FTMT20900042246.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.1714 non-coding 
CPAT coding probability 8.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBCCD1-4:65 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBCCD1-4:65
5.0 lnc-TBCCD1-4:65
5.1 lnc-TBCCD1-4:65
5.2 lnc-TBCCD1-4:65