Transcript: lnc-TBC1D22A-4:19

Basic information

LNCipedia transcript ID: lnc-TBC1D22A-4:19 
LNCipedia gene ID: lnc-TBC1D22A-4
Location (hg38): chr22:47631771-47687049
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 704 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224271.1|FTMT28700013670.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.1918 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TBC1D22A-4:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TBC1D22A-4:19
5.0 lnc-TBC1D22A-4:19
5.1 lnc-GRAMD4-8:13
5.2 lnc-TBC1D22A-4:19